llapack linking error (refers to issue 118 in old repository)

saigegit / SAIGE

Development for SAIGE and SAIGE-GENE(+)

GNU General Public License v3.0

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llapack linking error (refers to issue 118 in old repository) #6

Closed mverkerk closed 2 years ago

mverkerk commented 2 years ago

Not sure where ${LAPACK_LIBS} should be defined ( looking at src/Makevars ), but adding

" -L../lib64 -llapack " to:

PKG_LIBS = $(ZLIB_LIB) $(LAPACK_LIBS) $(BLAS_LIBS) $(FLIBS) -L../thirdParty/cget/lib/ -L../thirdParty/cget/lib64/ -lsuperlu -lzstd -L ../lib64 -llapack

Makes the compile work out on Centos 8 out of the box.

weizhouUMICH commented 2 years ago

Hi @mverkerk, Great to know! Thanks for letting us know! Would you like to push a request with the improvements you made? If so, please feel free to do that. If not it's ok, I can incorporate them into the code.

Thanks, Wei

weizhou0 commented 2 years ago

Hi @mverkerk, We have add it to the updated version 1.0.1.

Thanks, Wei