Open NomiCentarix opened 7 months ago
Thanks for the bug report. It is possible something has changed at the EBI end. I will try to check.
I think the bug is related to the concurrent part here https://github.com/saketkc/pysradb/blob/99d0ef76f85f64659388c219e639c47324e7f213/pysradb/sraweb.py#L694
Calling fetch_ena_fastq
works as expected and retrieve the correct URLs
from pysradb.sraweb import SRAweb
db = SRAweb()
db.fetch_ena_fastq("SRP059263")
Describe the bug The columns "ena_fastq_http", "ena_fastq_http" and "ena_fastq_http" are all NA. I tested the code in several environments, and no change. (the data does exist in the same path as before http://ftp.sra.ebi.ac.uk/vol1/fastq/SRR236/077/SRR23630177/SRR23630177_1.fastq.gz)
To Reproduce
Desktop (please complete the following information):
thanks