salesforce / progen

Official release of the ProGen models
BSD 3-Clause "New" or "Revised" License
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How to generate sequences of a particular family using PROGEN2? #27

Open Sireesiru opened 1 year ago

Sireesiru commented 1 year ago

Hello, I would like to use PROGEN2 package to generate CAS (CRISPR -CAS) family of proteins. How can I use sample.py for this? The paper says that PROGEN2 generates sequences in controlled fashion using tags. What is the tag for CAS family? In the following command: python3 sample.py --model ${model} --t 0.8 --p 0.9 --max-length 1024 --num-samples 2 --context "1' what is context? is this the tags?

ZeroKeng commented 1 year ago

Hello, I would like to use PROGEN2 package to generate CAS (CRISPR -CAS) family of proteins. How can I use sample.py for this? The paper says that PROGEN2 generates sequences in controlled fashion using tags. What is the tag for CAS family? In the following command: python3 sample.py --model ${model} --t 0.8 --p 0.9 --max-length 1024 --num-samples 2 --context "1' what is context? is this the tags?

I would like to know the answer to this question too. LOL

Admire7494 commented 11 months ago

Hello, I would like to use PROGEN2 package to generate CAS (CRISPR -CAS) family of proteins. How can I use sample.py for this? The paper says that PROGEN2 generates sequences in controlled fashion using tags. What is the tag for CAS family? In the following command: python3 sample.py --model ${model} --t 0.8 --p 0.9 --max-length 1024 --num-samples 2 --context "1' what is context? is this the tags?

I would like to know the answer to this question too. LOL

Me too!