salilab / IHMValidation

Validation software for integrative models deposited to PDB
MIT License
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Remove all mentions of CX-MS data #82

Open aozalevsky opened 2 months ago

aozalevsky commented 2 months ago

from @benmwebb

Supplementary table mentions CX-MS:

CX-MS data, Linker name and number of crosslinks: L-Photo-Leucine, 3 cross-links

The source of CX-MS data string is https://github.com/salilab/IHMValidation/blob/9cccc769321bf52da491b210d93d250d2f28389f/ihm_validation/mmcif_io.py#L663

Which depends on python-ihm
https://github.com/ihmwg/python-ihm/blob/43892b1fa293e9ffd07c69222b689137cbd7bbf8/ihm/dataset.py#L105-L107

and, in the end, the dictionary https://github.com/ihmwg/IHMCIF/issues/102