MultiQC reports - Githubissues

salvadorlab / mbovpan

Mbovpan is a nextflow bioinformatic pipeline for Mycobacterium bovis pangenome analysis. The goal of Mbovpan is to help researchers to study the M. bovis pangenome in an automatic and easy way.

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MultiQC reports #1

Closed noahaus closed 2 years ago

noahaus commented 2 years ago

MultiQC can help summarize the quality of data from the SNP calling and Pangenome portions of the pipeline

Download BUSCO/QUAST/CheckM
Update MultiQC with conditional inputs based on what is available

noahaus commented 2 years ago

Decided to only focus on QUAST for simplicity. MultiQC operational in pipeline. Will be simple to add further outputs in the future.