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samWieczorek / old_Prostar

Graphical User Interface for the R-package DAPAR
http://www.bioconductor.org/packages/release/bioc/html/Prostar.html
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[BUG Prostar] Bug with Excel export files #25

Closed samWieczorek closed 2 years ago

samWieczorek commented 2 years ago

Describe the bug I have a Maxquant file. When I open it with prostar. I do a filter "at least 7 in one condition". It works. Then, in the "string based filtering" tab, I remove the Reversed that are tagged with a "+" in a column. It works, it removes 23.

Now, If I open the Maxquant file via excel, I do nothing on it, I close it by saving it as xls. I open this xls with prostar. I do a filter "at least 7 in one condition". It works. Then, in the "string based filtering" tab, I remove the Reversed that are tagged with a "+" in a column. It tells me that there are 0. But if I export, there are indeed revered that it has not removed. However, in the Reversed column, they are no longer tagged +.......

So, I don't understand anything anymore.

So my Maxquant saved in xls, I saved it in .txt.... and there again I find my 23 proteins.....

So there is a bug when you use an xls file.

samWieczorek commented 2 years ago

Transferred to prostarproteomics github's organization