Closed yaowang1111 closed 4 years ago
Hello,
it means that you specified a bad list of node sizes (second row of header file). Can you provide some additional information?
the BNdataset code is as follows:
dataset=BNDataset(data=reorganized_data,discreteness=c(TRUE,FALSE,FALSE,TRUE,TRUE,TRUE),node.sizes=c(2,8,8,7,7,4),variables=c('disagreement_trials','correct_percent1','correct_percent2','confidence_response1','confidence_response2','result'))
My _reorganizeddata contains 'correct_percent1','correct_percent2' which are continuous variables whose range are [1.00, 7.75], so i set the node.size to be 7,7, it won't work, then i tried 8,8, still the same error. When i delete these two variables, the code runs fine, i think it might be some problem with my setting continuous variables.
Thanks for the help.
Which version of bnstruct are you using?
What happens if you set the parameter at a lower value?
I'm using 1.0.6, and when i set the parameter at some lower values, the same error. So i changed the continuous variable to discrete variables at the preprocessing stage, the package work fine.
Now i'm in another trouble. I reshaped my data to be a [num_sample,(num_time_steps by num_variables)]( which is actually[55,240 by 5]) matrix if i understand the tutorial right. Then i try to create my dataset using the following code:
dataset.from.data=BNDataset(data=dbn_data,discreteness=c(TRUE,TRUE,TRUE,TRUE,TRUE),node.sizes=c(2,3,7,7,4),num.time.steps =240,variables=c('disagreement_trials','correct_percent1','confidence_response1','confidence_response2','result'))
The error report is invalid class “BNDataset” object: incoherent number of variable names
Not sure where the problem is. Thanks for the help!
You are doing correctly. It looks like there was a bug when instantiating a BNDataset with multiple time steps directly (without loading the data from a file).
I have fixed it, can you please try with the latest commit?
The new commit solved my problem. Thanks again!
I did some googleing but found no helpful information, please help~
... ... ... ... ... ... ... ... bnstruct :: learning the structure using MMHC ... ... ... ... ... ... ... ... ... bnstruct :: learning using MMHC completed. ... ... ... ... ... ... ... ... bnstruct :: learning network parameters ... Error in validObject(x) : invalid class “BN” object: incorrect list of quantiles