samtools / bcftools

This is the official development repository for BCFtools. See installation instructions and other documentation here http://samtools.github.io/bcftools/howtos/install.html
http://samtools.github.io/bcftools/
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bcftools merge raises segmentation fault #1972

Closed alexeybondarev closed 1 year ago

alexeybondarev commented 1 year ago

while trying to merge two vcfs with bcftools 1.18 bcftools 1.16 works fine

pd3 commented 1 year ago

Unfortunately, the issue as stated is not helpful at all, we need a small test case to reproduce the problem.

alexeybondarev commented 1 year ago

Well, I'm not sure what kind of information could be helpful I'm using Ubuntu 22.04.2 LTS Снимок экрана от 2023-08-14 14-11-39

On the screen you could see two merge commands for 1.16 and 1.18

pd3 commented 1 year ago

We need a small test case, i.e. the exact command that was used and the actual files to reproduce the problem.