Use REF, ALT, etc as regex in filter expressions

samtools / bcftools

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Use REF, ALT, etc as regex in filter expressions #2074

Open njspix opened 9 months ago

njspix commented 9 months ago

Is it possible to use fields as the target of a match? For example, I'd like to do something like the following:

bcftools view --include 'FORMAT/SP ~ ALT'

Thanks!