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samtools
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htscodecs
Custom compression for CRAM and others.
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Change the version of FreeBSD for cirrus-ci to 14.1
#129
jkbonfield
opened
3 days ago
0
Compress can not handle blocks larger than 1.25 Mib
#128
mrietveld
opened
1 week ago
1
Improve checking of *out_size in rans4x16 & arith
#127
jkbonfield
closed
2 months ago
2
Release 1.6.1
#126
jkbonfield
closed
2 months ago
0
Wextra
#125
jkbonfield
closed
3 months ago
0
Use unsigned chars for ctype macros.
#124
jkbonfield
closed
4 months ago
1
Github Actions configuration
#123
jkbonfield
closed
4 months ago
0
sample PR
#122
jkbonfield
closed
4 months ago
0
Add windows build via github Actions
#121
jkbonfield
closed
4 months ago
1
Do not build tests by default.
#120
teo-tsirpanis
closed
5 months ago
3
Avoid disabled typedef in FreeBSD-specific code
#119
jmarshall
closed
6 months ago
2
Test for more avx512 functions
#118
daviesrob
closed
6 months ago
0
Fix new clang -std=c99 -pedantic warnings about func()
#117
jkbonfield
closed
6 months ago
0
Add cpuid checks behind an HAVE_CPUID check.
#116
jkbonfield
closed
6 months ago
11
Undefined symbols ___cpuid_count ___get_cpuid_max building on Mac OS X 10.7
#115
ryandesign
closed
6 months ago
8
Add release 1.6.0
#114
jkbonfield
closed
11 months ago
0
Allow builds on old gcc's that don't like declarations in for loops
#113
daviesrob
closed
11 months ago
0
Add explicit -mpopcnt to avx2 and avx512 builds.
#112
jkbonfield
closed
1 year ago
2
Remove undefined behaviour in transpose_and_copy.
#111
jkbonfield
closed
1 year ago
0
Add explicit -mpopcnt to avx2 and avx512 builds.
#110
jkbonfield
closed
1 year ago
2
zig cc complains about inlining a function into anlother without support for 'popcnt'
#109
dkj
closed
1 year ago
1
Fix tok3 encoding bug with duplicated streams.
#108
jkbonfield
closed
1 year ago
0
Fix tok3 decode bounds checking.
#107
jkbonfield
closed
1 year ago
1
Name tokeniser fixes.
#106
jkbonfield
closed
1 year ago
0
tok3_encode_names crashes on arm on invalid input
#105
shubhamchandak94
closed
1 year ago
1
Updates for 1.5.2 release
#104
jkbonfield
closed
1 year ago
0
A mixture of fuzz-testing improvements
#103
jkbonfield
closed
1 year ago
1
Fix an overflow with freq=4096 in the SSE4 decoder.
#102
jkbonfield
closed
1 year ago
0
Remove divide by zero in rANS 4x8.
#101
jkbonfield
closed
1 year ago
2
Correct a buffer read-overflow (max 8 bytes) in AVX2 rans decode
#100
jkbonfield
closed
1 year ago
0
rans_compress on empty input
#99
shubhamchandak94
closed
1 year ago
4
Compiling for ARM
#98
pabloaledo
closed
1 year ago
2
Chandak overflow
#97
jkbonfield
closed
1 year ago
6
Downfall mitigation via simulated gathers
#96
jkbonfield
closed
1 year ago
2
Fix a 1 byte heap buffer overflow read.
#95
jkbonfield
closed
1 year ago
0
Add tab_size void cast to silence compiler warning
#94
lczech
closed
1 year ago
1
Minor compiler warning: unused-but-set-variable
#93
lczech
closed
1 year ago
0
Miscellaneous rANS 32x speed ups
#92
jkbonfield
closed
1 year ago
2
Fix ARM compilation with certain Conda compilers
#91
jkbonfield
closed
1 year ago
0
Fix illegal shift complaint from UBSAN
#90
daviesrob
closed
1 year ago
0
Compilation Error
#89
victoryLym
closed
1 year ago
3
Compilation issue on ARM64 architecture
#88
RenzoTale88
closed
1 year ago
12
Updates for 1.5.1 release
#87
jkbonfield
closed
1 year ago
0
Trivial bug fix to tests/r4x16pr demo.
#86
jkbonfield
closed
1 year ago
0
Amd avx512
#85
jkbonfield
closed
1 year ago
0
Add include of config.h to test programs.
#84
jkbonfield
closed
1 year ago
0
Add FreeBSD to the CI tests
#83
jkbonfield
closed
1 year ago
0
Only use the ARM NEON 32-way unrolled rANS on AArch64.
#82
jkbonfield
closed
1 year ago
4
rANS_static32x16pr_neon.c doesn't build on AArch32
#81
clausecker
closed
1 year ago
8
Updates for 1.5.0 release
#79
jkbonfield
closed
1 year ago
0
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