samtools / htsjdk

A Java API for high-throughput sequencing data (HTS) formats.
http://samtools.github.io/htsjdk/
283 stars 242 forks source link

Remove indexingBin from SAMRecord and only compute it when writing BA… #1257

Closed tfenne closed 5 years ago

tfenne commented 5 years ago

…M and during index creation.

Description

Please explain the changes you made here. Explain the motivation for making this change. What existing problem does the pull request solve?

Checklist

tfenne commented 5 years ago

Closing as I cannot get this to work with the long cigar code.