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samtools / htslib

C library for high-throughput sequencing data formats
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tok3_decode_names() in cram/cram_io.c is undefined. #1508

Closed wangyugui closed 2 years ago

wangyugui commented 2 years ago

Hi,

tok3_decode_names() in cram/cram_io.c is undefined.

or which external lib we need for it?

Best regards.

wangyugui commented 2 years ago

We need to checkout master of subproject htscodecs

jkbonfield commented 2 years ago

This can be automatically done when initially cloning with:

git clone --recurse <giturl>

Or added later on if you forget (as I invariably do) via:

git submodule update --init

(These are both in the INSTALL file.)