samtools / htslib

C library for high-throughput sequencing data formats
Other
789 stars 447 forks source link

htslib make install error on 3 production servers #1561

Closed comatosejones closed 1 year ago

comatosejones commented 1 year ago

/usr/bin/ld: cannot find @VERSION_SCRIPT_LDFLAGS@: No such file or directory collect2: error: ld returned 1 exit status make: *** [Makefile:358: libhts.so] Error 1

daviesrob commented 1 year ago

You probably need to rebuild your configure script and re-run it:

autoreconf -i
./configure
comatosejones commented 1 year ago

That worked, ty -- would it be prudent to rebuild before every update?

jkbonfield commented 1 year ago

Yes. It won't harm, and any new release may in theory add something to the configure.ac and related machinery.