Open samueldnj opened 7 years ago
Created a plotMCMCpar function that plots the MS and SS posteriors for a given parameter, simulation and replicate. Currently won't plot parameters that appear in one model but not the other, eg the across-species correlated deviations don't get used in SS model, so these aren't supported
plotMCMCbio() plots posterior biomass estimates for a given rep and sim. Needs work.
when will I see some of these cool results?
Sean Cox Associate Professor Sch. of Resource and Environmental Mgmt Simon Fraser University 8888 University Drive Burnaby, B.C. V5A 1S6 website - http://www.rem.sfu.ca/fishgrp email - spcox@sfu.ca phone - 778.782.5778
On Oct 19, 2016, at 1:53 PM, Samuel Johnson notifications@github.com wrote:
plotMCMCbio() plots posterior biomass estimates for a given rep and sim. Needs work.
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See issue #17 for how to improve plotting the MCMC output
biomass trajectories
Only really used for plotting posterior biomass estimates
Parameter estimates
Could be good to plot entire distributions