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samuell / luigis_monkey_wrench

*** DEPRECATED!!! *** The functionality of library is planned to move into SciLuigi, together with even more great functionality.
https://github.com/samuell/sciluigi
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Luigis showing invalid syntax ? #2

Open pinninti19 opened 6 years ago

pinninti19 commented 6 years ago

HI I try to run it showing invalid syntax, Can you help me in building my own pipeline for genome analysis ?

Curium:~/test1mw/luigis_monkey_wrench$ python workflow_example.py --local-scheduler MyWorkFlow Traceback (most recent call last): File "workflow_example.py", line 2, in from luigis_monkey_wrench import * File "/home/likithreddy/test1mw/luigis_monkey_wrench/luigis_monkey_wrench/init.py", line 86 print commands.getstatusoutput(cmd) ^ SyntaxError: invalid syntax

samuell commented 6 years ago

Hi @pinninti19 note that this library is no longer maintained (I put up a more visible notice on the README.md file now, that it is deprecated).

Unfortunately I don't have time to support this library, or to provide general bioinformatics help.

If you need a lot of support, you might want to consider using a more established pipeline tool like Nextflow or Snakemake, which has pretty large communities already, that can help out.

Also, for general bioinformatics support, in case you haven't checked out them yet, have a look at the following community driven support sites:

Kind Regards // Samuel