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sandberg-lab
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txburst
Transcriptional burst kinetics inference and analysis described in the article "Genomic encoding of transcriptional burst kinetics" (Larsson et. al 2019).
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Can we compute tx burst kinetics on non-allelic scRNAseq datasets
#19
harshini-c
opened
2 years ago
0
allelic read count file
#18
Hemantcnaik
closed
3 years ago
0
Error while running txburstML.py
#17
srishastry123
closed
3 years ago
1
NA p-values from txburstTEST.py
#16
piplus2
closed
3 years ago
2
the reason behind burst size always > 1?
#15
vitkl
closed
3 years ago
2
overflow error
#14
piplus2
closed
4 years ago
1
Using txburst
#13
Hemantcnaik
opened
4 years ago
0
Request for processed data for CAST allele in mESCs
#12
yharigaya
closed
4 years ago
2
High UMI counts when processing raw data
#11
CS-IRB
opened
5 years ago
0
Influence of TATA & Inr elements
#10
Maarten-vd-Sande
opened
5 years ago
5
MaximumLikelihood estimation depends on order of input values
#9
Maarten-vd-Sande
closed
5 years ago
4
Profile likelihood calculation
#8
Maarten-vd-Sande
closed
5 years ago
3
Parameters (burst freq and burst size) outside fig 1b range
#7
Maarten-vd-Sande
closed
5 years ago
7
Code for producing the Figure 4e
#6
WT215
opened
5 years ago
0
smFISH data
#5
WT215
closed
5 years ago
1
About Extended Data Fig.3d
#4
WT215
closed
5 years ago
1
Listed dependencies incompatible
#3
Maarten-vd-Sande
opened
5 years ago
0
UMI counts csv file
#2
olechnwin
opened
5 years ago
1
Extension from BP3 to BP4
#1
mfilip8
opened
5 years ago
2