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sanderlab / CellBox

CellBox: Interpretable Machine Learning for Perturbation Biology
MIT License
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Add Function Documentation #43

Closed cannin closed 1 year ago

cannin commented 1 year ago

Add documentation to the following functions:

Mustardburger commented 1 year ago

I have a question about the function cellbox.utils.md5 at line 71 in main.py. Why do we need this function?

DesmondYuan commented 1 year ago

Please take a look at the PR #47. Feel free to add comments / approve it if LGTM.

I have a question about the function cellbox.utils.md5 at line 71 in main.py. Why do we need this function?

This was used when calling prepare_workdir() under scripts/main.py, which creates the working directory for each experiment and generates necessary files. This md5 string adds an unique identifier to each experiment we run as an affix to the filepath so that we can always keep the reference of each different config we have used.