Cluster the pairwise identity matrix

sanderlab / alignmentviewer

Multiple sequence alignment visualizer

http://alignmentviewer.org

MIT License

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Cluster the pairwise identity matrix #30

Open rocreguant opened 5 years ago

rocreguant commented 5 years ago

It may be useful to offer a ranking scheme that deliberately clusters sequences according to their local similarity to each other (ie maximising the clarity of these patterns), rather than comparing everything to the first sequence.