Hello! First of all, thank you for making this tool free and available to the public 😊
I'm having troubles installing OperonSEQer. When I run pip install -r requirements.txt the following output + error message appears:
Collecting pandas==1.3
Using cached pandas-1.3.0-cp38-cp38-manylinux_2_5_x86_64.manylinux1_x86_64.whl (10.6 MB)
Collecting numpy==1.22
Using cached numpy-1.22.0-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (16.8 MB)
Collecting configargparse
Using cached ConfigArgParse-1.5.3-py3-none-any.whl (20 kB)
Collecting seaborn==0.11.2
Using cached seaborn-0.11.2-py3-none-any.whl (292 kB)
Collecting scipy==1.7.1
Using cached scipy-1.7.1-cp38-cp38-manylinux_2_5_x86_64.manylinux1_x86_64.whl (28.4 MB)
Collecting scikit-learn==1.0
Using cached scikit_learn-1.0-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (25.8 MB)
Collecting matplotlib==3.4.3
Using cached matplotlib-3.4.3-cp38-cp38-manylinux1_x86_64.whl (10.3 MB)
Collecting xgboost==1.4.2
Using cached xgboost-1.4.2-py3-none-manylinux2010_x86_64.whl (166.7 MB)
ERROR: Could not find a version that satisfies the requirement libomp==11.1.0 (from versions: none)
ERROR: No matching distribution found for libomp==11.1.0
I installed libomp with Homebrew Formulae and then ran pip install ., but then I got the following output + same error message:
Processing /home/gcabebe/trx_tools/OperonSEQer
Preparing metadata (setup.py) ... done
Collecting pandas==1.3
Using cached pandas-1.3.0-cp38-cp38-manylinux_2_5_x86_64.manylinux1_x86_64.whl (10.6 MB)
Collecting numpy==1.22
Using cached numpy-1.22.0-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (16.8 MB)
Collecting configargparse
Using cached ConfigArgParse-1.5.3-py3-none-any.whl (20 kB)
Collecting seaborn==0.11.2
Using cached seaborn-0.11.2-py3-none-any.whl (292 kB)
Collecting scipy==1.7.1
Using cached scipy-1.7.1-cp38-cp38-manylinux_2_5_x86_64.manylinux1_x86_64.whl (28.4 MB)
Collecting scikit-learn==1.0
Using cached scikit_learn-1.0-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (25.8 MB)
Collecting matplotlib==3.4.3
Using cached matplotlib-3.4.3-cp38-cp38-manylinux1_x86_64.whl (10.3 MB)
Collecting xgboost==1.4.2
Using cached xgboost-1.4.2-py3-none-manylinux2010_x86_64.whl (166.7 MB)
Collecting pyinstaller==3.6
Using cached PyInstaller-3.6.tar.gz (3.5 MB)
Installing build dependencies ... done
Getting requirements to build wheel ... done
Preparing metadata (pyproject.toml) ... done
ERROR: Could not find a version that satisfies the requirement libomp==11.1.0 (from operonseqer) (from versions: none)
ERROR: No matching distribution found for libomp==11.1.0
Can I get advice on resolving this issue? Thank you!
Hello! First of all, thank you for making this tool free and available to the public 😊
I'm having troubles installing OperonSEQer. When I run
pip install -r requirements.txtthe following output + error message appears:I installed libomp with Homebrew Formulae and then ran
pip install ., but then I got the following output + same error message:Can I get advice on resolving this issue? Thank you!