Changed get_targets_from_res_db.py script name to get_targets_from_db.py so it could be used again in the MLST pipeline. Created a new option for running MLST pipeline which is optional. Haven't yet implemented this as a regression test yet (as it can take a while to run).
Changed get_targets_from_res_db.py script name to get_targets_from_db.py so it could be used again in the MLST pipeline. Created a new option for running MLST pipeline which is optional. Haven't yet implemented this as a regression test yet (as it can take a while to run).