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sanger-bentley-group / GBS-Typer-sanger-nf

GBS Typer Pipeline in Nextflow
GNU General Public License v3.0
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Dev #65

Closed blue-moon22 closed 2 years ago

codecov-commenter commented 2 years ago

Codecov Report

Merging #65 (bfed98e) into main (6eaa377) will decrease coverage by 0.10%. The diff coverage is 97.53%.

@@            Coverage Diff             @@
##             main      #65      +/-   ##
==========================================
- Coverage   97.04%   96.94%   -0.11%     
==========================================
  Files          25       25              
  Lines        1726     1765      +39     
==========================================
+ Hits         1675     1711      +36     
- Misses         51       54       +3
Impacted Files Coverage Δ
tests/process_surface_typer_results_test.py 100.00% <ø> (ø)
bin/process_res_typer_results.py 94.08% <88.88%> (-0.96%) :arrow_down:
bin/process_serotyper_results.py 86.04% <100.00%> (+1.04%) :arrow_up:
tests/combine_results_test.py 100.00% <100.00%> (ø)
tests/file_utils_test.py 100.00% <100.00%> (ø)
tests/get_alleles_from_srst2_mlst_test.py 100.00% <100.00%> (ø)
tests/get_pbp_alleles_test.py 100.00% <100.00%> (ø)
tests/get_pbp_genes_from_contigs_test.py 100.00% <100.00%> (ø)
tests/get_targets_from_db_test.py 100.00% <100.00%> (ø)
tests/get_targets_from_samfile_test.py 100.00% <100.00%> (ø)
... and 3 more

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