sanger-pathogens / Artemis

Artemis is a free genome viewer and annotation tool that allows visualization of sequence features and the results of analyses within the context of the sequence, and its six-frame translation
http://sanger-pathogens.github.io/Artemis
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Artemis does not start #311

Closed Azkayamin closed 4 years ago

Azkayamin commented 4 years ago

I have the appropriate java version and previously used Artemis version 18.0.2. I have now deleted that version and downloaded the new one but Artemis is not starting on my windows. When I open artemis.jar file, it asks me how I want to open this file and shows applications in my laptop to open it, Please guide me on how to solve this issue. Thank you. Untitled

Aritrajoy commented 4 years ago

Exactly the same problem. Is it solved?

kpepper commented 4 years ago

The .jar should be automatically open, so it looks like your Windows doesn't know which program to use to run the artemis jar file. Can you select "Java" if you select the "More Apps" option? You could also try the second part of solution 2 in this article: https://windowsreport.com/jar-files-not-opening-windows-10/. Alternatively, as a quick fix you can create an artemis.bat file in the same directory and just add the following line to it, in a text editor:

java -jar artemis.jar

Then double-click on the .bat file to start instead.

Aritrajoy commented 4 years ago

I'm selecting Java in the more apps section but it's still not working.

On Mon, 10 Aug, 2020, 8:04 PM kpepper, notifications@github.com wrote:

The .jar should be automatically open, so it looks like your Windows doesn't know which program to use to run the artemis jar file. Can you select "Java" if you select the "More Apps" option? You could also try the second part of solution 2 in this article: https://windowsreport.com/jar-files-not-opening-windows-10/. Alternatively, as a quick fix you can create an artemis.bat file in the same directory and just add the following line to it, in a text editor:

java -jar artemis.jar

Then double-click on the .bat file to start instead.

— You are receiving this because you commented. Reply to this email directly, view it on GitHub https://github.com/sanger-pathogens/Artemis/issues/311#issuecomment-671392789, or unsubscribe https://github.com/notifications/unsubscribe-auth/AQSAKBKUBURCIAKVSLA6R4DSAAAOLANCNFSM4OJU7NRQ .

kpepper commented 4 years ago

Did you try the other suggestions? Can you check what Java version you are running using the following in a dos window:

java -version

Aritrajoy commented 4 years ago

I'm trying to save it as a .bat file and let's see if that works. I'll let you know.

Thanking you Aritrajoy

On Mon, 10 Aug, 2020, 8:11 PM kpepper, notifications@github.com wrote:

Did you try the other suggestions? Can you check what Java version you are running using the following in a dos window:

java -version

— You are receiving this because you commented. Reply to this email directly, view it on GitHub https://github.com/sanger-pathogens/Artemis/issues/311#issuecomment-671397045, or unsubscribe https://github.com/notifications/unsubscribe-auth/AQSAKBKSJ4ZRP7PM7K7YF3LSAABJPANCNFSM4OJU7NRQ .

Aritrajoy commented 4 years ago

It is working now. I can open Artemis now and work on it.

Thanks a lot.

Regards, Aritrajoy Das.

On Mon, 10 Aug, 2020, 8:48 PM Aritrajoy Das, aritrajoy.das@gmail.com wrote:

I'm trying to save it as a .bat file and let's see if that works. I'll let you know.

Thanking you Aritrajoy

On Mon, 10 Aug, 2020, 8:11 PM kpepper, notifications@github.com wrote:

Did you try the other suggestions? Can you check what Java version you are running using the following in a dos window:

java -version

— You are receiving this because you commented. Reply to this email directly, view it on GitHub https://github.com/sanger-pathogens/Artemis/issues/311#issuecomment-671397045, or unsubscribe https://github.com/notifications/unsubscribe-auth/AQSAKBKSJ4ZRP7PM7K7YF3LSAABJPANCNFSM4OJU7NRQ .

kpepper commented 4 years ago

Excellent. You can use the same trick for the other jars if required.