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sanger-pathogens / Roary

Rapid large-scale prokaryote pan genome analysis
http://sanger-pathogens.github.io/Roary
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302 stars 189 forks source link

installation seem to be stuck #585

Open azat-badretdin opened 1 year ago

azat-badretdin commented 1 year ago

I installed all prerequisites to Roary and now I am strying to install the product itself. It seems to be stuck:

$ conda install roary
Collecting package metadata (current_repodata.json): done
Solving environment: failed with initial frozen solve. Retrying with flexible solve.
Solving environment: failed with repodata from current_repodata.json, will retry with next repodata source.
Collecting package metadata (repodata.json): done
Solving environment: /

The rotation symbol "/" rotates now for about 40 minutes. How long should I wait?

Oelsakha commented 1 year ago

I have the same problem. Do you have any solution?

azat-badretdin commented 1 year ago

I installed it using cpan instead. It is listed in documentation after an installation method using conda.

After that do not forget to check all executables from installed prerequisites that they are in the PATH.

dutchscientist commented 1 year ago

Tip: change to Mamba, the resolver of Conda is extremely slow. Mamba is a lot better.