Cloud not obtain clear phylogenic tree

sanger-pathogens / Roary

Rapid large-scale prokaryote pan genome analysis

http://sanger-pathogens.github.io/Roary

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Cloud not obtain clear phylogenic tree #621

Open Ronykumawat opened 3 months ago

Ronykumawat commented 3 months ago

Hello, I am using Roary to generate a pan-genome with 682 .gff files obtained from Prokka. The Roary command I'm using is python3 roary_plot.py --label mytree.newick the tree made by these command is not clear and line are overlapping each other.

pangenome_matrix

Dkphilips71 commented 2 months ago

Did you maneuver?