sanger-pathogens / SnpEffWrapper

Takes a VCF and applies annotations from a GFF using SnpEff
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Ignore all VCF headers during checks #8

Closed bewt85 closed 8 years ago

bewt85 commented 8 years ago

I found an example of a FILTER which had an escaped " in it. This sort of thing could be a right pain to regex so instead I've decided to just ignore all of the headers because this tool isn't a general VCF validator.