Simple question: Can you use assemblies with ariba?

sanger-pathogens / ariba

Antimicrobial Resistance Identification By Assembly

http://sanger-pathogens.github.io/ariba/

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Closed slvrshot closed 3 years ago

slvrshot commented 4 years ago

Or is the input only raw sequences? If it is only raw sequences I will need to create simulated reads for some of my samples.

Thanks!