Support for downloading cgMLST schemes?

sanger-pathogens / ariba

Antimicrobial Resistance Identification By Assembly

http://sanger-pathogens.github.io/ariba/

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Open slvrshot opened 3 years ago

slvrshot commented 3 years ago

I was curious if ariba could download a cgMSLT scheme from pubMLST or do I have to create a custom database for all 1.5K loci?

lskatz commented 3 years ago

Did you ever figure out this workflow @slvrshot ?