Simple change to not die when iva_qc throws an error. Similar to the other tools run by assembly improvement, this now just runs the command and any errors thrown will be output on stderr. These will get logged in the .e files produced by the pipeline but won't stop the pipeline from carrying on.
Simple change to not die when iva_qc throws an error. Similar to the other tools run by assembly improvement, this now just runs the command and any errors thrown will be output on stderr. These will get logged in the .e files produced by the pipeline but won't stop the pipeline from carrying on.
Files changed:
lib/Bio/AssemblyImprovement/IvaQC/Main.pm t/IvaQC/Main.t