first of all, this is not an issue, instead it's a silly question about using it in a non-standard context.
Here is my question: I have a virome metagenome, and I've assembled it using spades, then made a consensus viral contigs using savage with spades scaffolds as reference. Now I'm thinking if it's possible to circulate the consensus viral contigs using spades scaffolds as the input long reads?
Hi,
first of all, this is not an issue, instead it's a silly question about using it in a non-standard context.
Here is my question: I have a virome metagenome, and I've assembled it using
spades
, then made a consensus viral contigs usingsavage
with spades scaffolds as reference. Now I'm thinking if it's possible to circulate the consensus viral contigs using spades scaffolds as the input long reads?Thanks, Shengwei