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sanger-pathogens / iva

de novo virus assembler of Illumina paired reads
http://sanger-pathogens.github.io/iva/
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Support samtools 1.3 #57

Closed martinghunt closed 8 years ago

martinghunt commented 8 years ago

"samtools sort" in version 1.3 dropped support for old usage. Need to make IVA compatible with samtools 0.1.19-1.3.