I am running tests from a University Owned CentOS 7.4, where I do not have root privilege. I tried running tests using python 2 and 3, and both gave me this error. I tried proceeding with installation anyway, and the iva executable seems to be working just fine.
Attached is the temporary folder created for the test. I am not sure what other information I should provide at this point, please let me know and I will provide them. Thanks for your help.
tmp.qc_external_test_run_gage.zip
When I do "python setup.py test", the "run_gage" test fails with the following message:
Traceback (most recent call last): File "/Users/myname/iva/iva/tests/qc_external_test.py", line 36, in test_run_gage self.assertEqual(got_lines[1:], expected_lines[1:]) AssertionError: Lists differ: ['Con[223 chars]n', 'Chaff bases: 0\n', 'Duplicated Reference [529 chars]0\n'] != ['Con[223 chars]n', 'Genome Size: 3000\n', 'Assembly Size: 299[870 chars]s\n']
I am running tests from a University Owned CentOS 7.4, where I do not have root privilege. I tried running tests using python 2 and 3, and both gave me this error. I tried proceeding with installation anyway, and the iva executable seems to be working just fine.
Attached is the temporary folder created for the test. I am not sure what other information I should provide at this point, please let me know and I will provide them. Thanks for your help. tmp.qc_external_test_run_gage.zip