Info in VCF output format

sanger-pathogens / snp-sites

Finds SNP sites from a multi-FASTA alignment file

http://sanger-pathogens.github.io/snp-sites/

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Closed ricardoruiz2897 closed 6 years ago

ricardoruiz2897 commented 6 years ago

Is there a way with snp-sites to get data on to the info column on a VCF output?

ViriatoII commented 4 years ago

Hey @ricardoruiz2897,

Got no answer? I'm also curious, this vcf looks very different from all the vcfs I've seen so far, it looks more like an SNP matrix..