Error with Mauve alignment input

sanger-pathogens / snp-sites

Finds SNP sites from a multi-FASTA alignment file

http://sanger-pathogens.github.io/snp-sites/

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Error with Mauve alignment input #77

Closed jglenn72 closed 5 years ago

jglenn72 commented 5 years ago

Mauve formatted alignment input throws error about sequences of unequal length (by 1bp). Using conda installed version 2.4.1 with OSX. Is this a known issue?

andrewjpage commented 5 years ago

Its not a known issue, I would guess one of your sequences is 1 base shorter.