I am working on Klebsiella pneumoniae phylogenetic analysis based on the snps sites of the core genome (snp-sites tool).
I would appreciate very much if you could help to localize the correct output files which show the following information:
- the distribution and location of SNPs for each isolate along the core genome
- the ratio of nonsynonymous-to-synonymous SNPs
I am working on Klebsiella pneumoniae phylogenetic analysis based on the snps sites of the core genome (snp-sites tool). I would appreciate very much if you could help to localize the correct output files which show the following information:
Thank you very much for your help