Is there a way to extract SNP mutations form the VCF file ?

sanger-pathogens / snp-sites

Finds SNP sites from a multi-FASTA alignment file

http://sanger-pathogens.github.io/snp-sites/

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Open ASQWZXED opened 3 years ago

ASQWZXED commented 3 years ago

Hello,

I have run snp-sites and I got the three files. But I want to to have SNP mutations from VCF file. Is there a way from snp-sites ?

Thank you.