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sanger-tol / PretextMap

Paired REad TEXTure Mapper. Converts SAM formatted read pairs into genome contact maps.
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Using .pairs as input does not work #8

Open ivargr opened 7 months ago

ivargr commented 7 months ago

First, thanks for a great tool!

As several others have pointed out, PretextMap crashes with segfault when .pairs is used as input.

It would be nice to know whether there is any ongoing work or plans to fix this or not as it would be great to have support for .pairs.

additive3 commented 6 months ago

Hi @ivargr We are hoping to resume development on Pretext Suite tools soon and will look to fix pairs input problems