Currently the pipeline needs one entire instance to run each of [Hap1, Hap2, mito, chloro, {number of cobionts id'ed}]. Pipeline should therefore be refactored so that these can all be dynamically run on a singular head job.
FCS can also run sequentially on multiple inputs, so this should be utilised.
We should look at this once the current version of the pipeline can create a usable output.
Description of feature
Currently the pipeline needs one entire instance to run each of [Hap1, Hap2, mito, chloro, {number of cobionts id'ed}]. Pipeline should therefore be refactored so that these can all be dynamically run on a singular head job.
FCS can also run sequentially on multiple inputs, so this should be utilised.
We should look at this once the current version of the pipeline can create a usable output.