The assemblies we work with have a high likely hood of not existing in the Blast DB and so their TaxID will not be found. Currently this will cause a crash along the lines of:
Command error:
BLAST Database error: Taxonomy ID(s) not found.Taxonomy ID(s) not found. This could be because the ID(s) provided are not at or below the species level. Please use get_species_taxids.sh to get taxids for nodes higher than species (see https://www.ncbi.nlm.nih.gov/books/NBK546209/).
This issue will track the number of times we come across this and depending on how often we will look into a more permenant fix.
Description of the bug
The assemblies we work with have a high likely hood of not existing in the Blast DB and so their TaxID will not be found. Currently this will cause a crash along the lines of:
This issue will track the number of times we come across this and depending on how often we will look into a more permenant fix.
Command used and terminal output
No response
Relevant files
No response
System information
No response