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sanger-tol / blobtoolkit

Nextflow pipeline for BlobToolKit for Sanger ToL production suite
https://pipelines.tol.sanger.ac.uk/blobtoolkit
MIT License
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nf-core module: entrezdirect/xtract #4

Closed alxndrdiaz closed 1 year ago

alxndrdiaz commented 2 years ago

Write entrez-direct nf-core module: entrezdirect/xtract; ; nf-core modules issue: new module: entrezdirect/esearch #1832.

alxndrdiaz commented 2 years ago

Latest entrez-direct version: 16.2-0 Bioconda Package Index.

alxndrdiaz commented 2 years ago

This module should work along with esearch and esummary to get the same results from the script generate_config.py implemented in the Snakemake pipeline.

alxndrdiaz commented 1 year ago

PR merged: new (fixed) module: entrezdirect/xtract #1926.