This PR implements the coverage_TSV which combines the TSV files output by mosdepth and count_busco_genes and also integrates it into the workflow. GitHub CI not working because files needed for BUSCO are on lustre.
PR checklist
[x] This comment contains a description of changes (with reason).
[x] Make sure your code lints (nf-core lint).
[x] Ensure the test suite passes (nextflow run . -profile test,docker --outdir <OUTDIR>).
[x] Output Documentation in docs/output.md is updated.
[x] README.md is updated (including new tool citations and authors/contributors).
coverage_tsv module
This PR implements the coverage_TSV which combines the TSV files output by mosdepth and count_busco_genes and also integrates it into the workflow. GitHub CI not working because files needed for BUSCO are on lustre.
PR checklist
nf-core lint).nextflow run . -profile test,docker --outdir <OUTDIR>).docs/output.mdis updated.README.mdis updated (including new tool citations and authors/contributors).