Closed ksenia-krasheninnikova closed 6 months ago
nf-core lint
overall result: Passed :white_check_mark: :warning:Posted for pipeline commit eb3f9a6
+| ✅ 129 tests passed |+
#| ❔ 19 tests were ignored |#
!| ❗ 4 tests had warnings |!
@gq1 PR is ready for review. Many thanks.
Here is the updated version of release instruction from @muffato. https://pipelines.tol.sanger.ac.uk/docs/contributing/pipeline-release It seems you did a lots of changes for this release, probably not a small number change, but you already on 0.9. Probably it will be ok.
I agree. 0.9.1 would be for bug-fixes only. Here you've got real features and differences. This should be 0.10.0
Addressed the comments from the code review. Also, updated the code in order to be able to optionally switch on plastid search in oatk - this was missed in the previous PR. And updated the json schema for the input yaml file. I will only need to update the release date if there are no other comments. Ready for re-review @gq1 @muffato
New release for organelles subworkflow
PR checklist
nf-core lint
).nextflow run . -profile test,docker --outdir <OUTDIR>
).docs/usage.md
is updated.docs/output.md
is updated.CHANGELOG.md
is updated.README.md
is updated (including new tool citations and authors/contributors).