sanger-tol / genomenote

Nextflow DSL2 pipeline to generate a Genome Note, including assembly statistics, quality metrics, and Hi-C contact maps. This workflow is part of the Tree of Life production suite.
https://pipelines.tol.sanger.ac.uk/genomenote
MIT License
24 stars 6 forks source link

Added a new sub workflow #annotation_statistics.nf that outputs the annotation statistics in the gff3 file to solve issue #121 #129

Closed SandraBabirye closed 3 months ago

SandraBabirye commented 4 months ago

Added a new sub workflow called annotation_statistics.nf modified the nextflow.config file with added parameter "params.annotation_set" - the path to the gff3 file added a new module from nf_core - gt/stat

BethYates commented 3 months ago

This PR was created in error and has been superceeded by #133