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sanger-tol / genomenote

Nextflow DSL2 pipeline to generate a Genome Note, including assembly statistics, quality metrics, and Hi-C contact maps. This workflow is part of the Tree of Life production suite.
https://pipelines.tol.sanger.ac.uk/genomenote
MIT License
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Sex chromosomes #24

Open priyanka-surana opened 2 years ago

priyanka-surana commented 2 years ago

Description of feature

Are sex chromosomes localised homologous pairs?

priyanka-surana commented 2 years ago

What information are we collecting? And where is it saved?

muffato commented 2 years ago

That's also assessed and recorded by GRIT in their Jira server. I think the Platforms team will be working on a module to synchronise some information from Jira to STS, and the Genome Note will include a lot of information from STS / Jira anyway. We may not have to do anything ourselves to get this information added to the genome note.