sanger-tol / treeval

Pipelines for the production of Treeval data
https://pipelines.tol.sanger.ac.uk/treeval
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Synteny isn't running consistently #197

Closed DLBPointon closed 7 months ago

DLBPointon commented 7 months ago

Description of the bug

The synteny command is not always working, this has only recently been noticed as the three clades that use this function have been few and far between in production.

I think this is due to how the module is written not prioritising the bash as it should. The commands in the .command.sh are being generated as expected so it must be the module.

Command used and terminal output

No response

Relevant files

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System information

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