Closed DLBPointon closed 7 months ago
Also occuring with Minimap2_align
memory = { check_max( 1.GB * ( reference.size() < 2e9 ? 30 : Math.ceil( ( reference.size() / 1e+9 ) * 20 ) * Math.ceil( task.attempt * 1 ) ) , 'memory') }
Resolved to 115MB
I think this is an edge case with certain genome sizes causing the error
Description of the bug
Some of the base.config equations are being parsed incorrectly, for instance: Miniprot_index has the config
With a genome of 1.4Gb is being resolved as 351MB
Needs further investigation, perhaps adding a round up if something is being resolved. as a 0.3 and acting as a division rather than multiplier
Command used and terminal output
Relevant files
No response
System information
No response