sanger-tol / treeval

Pipelines for the production of Treeval data
https://pipelines.tol.sanger.ac.uk/treeval
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Add containers and conda package to local modules #45

Closed priyanka-surana closed 1 year ago

priyanka-surana commented 1 year ago

Description of the bug

For these local modules, please add a bioconda package and container. You can use a basic one: https://github.com/nf-core/modules/blob/master/modules/nf-core/md5sum/main.nf

From Matthieu:

motivated by making the pipeline usable outside of our production environment (currently at risk)

weaglesBio commented 1 year ago

The following will not be updated as the are being removed in the next update as part of issue #46:

weaglesBio commented 1 year ago

bb_generator is deprecated so will be removed.

weaglesBio commented 1 year ago

ECLint errors will be resolved as part of other issues.