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sanger-tol / variantcalling

This Nextflow DSL2 pipeline calls variants on long read alignment. It is run after sanger-tol/readmapping in the Sanger ToL production suite but with options to run on unaligned reads.
https://pipelines.tol.sanger.ac.uk/variantcalling
MIT License
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Create indices #43

Closed priyanka-surana closed 11 months ago

priyanka-surana commented 1 year ago

Description of feature

Create indices for aligned reads and the genome

gq1 commented 11 months ago

https://github.com/sanger-tol/variantcalling/pull/59