Closed gq1 closed 8 months ago
nf-core lint
overall result: Passed :white_check_mark:Posted for pipeline commit 3e8705c
+| ✅ 126 tests passed |+
#| ❔ 26 tests were ignored |#
@nf-core-bot fix linting
Push the updated
samtools merge
to nf-core The patch being pushed to nf-core and updated. https://github.com/nf-core/modules/pull/4258Update
bin/check_samplesheet.py
not to append the_T*
suffixes so that you don't need thereplaceAll
The script being updated only validate the samplesheet not transform it. https://github.com/sanger-tol/variantcalling/pull/59/commits/d6fa00f37eb2729b6c67b3d0a4d36f02e1536b35
PR checklist
nf-core lint
).nextflow run . -profile test,docker --outdir <OUTDIR>
).docs/usage.md
is updated.docs/output.md
is updated.CHANGELOG.md
is updated.README.md
is updated (including new tool citations and authors/contributors).