Gatekeeper is used to track the production and validation of batches of tag plates for sequencing. It is designed to interface with the Sequencescape LIMS.
🚨 Your current dependencies have known security vulnerabilities 🚨
This dependency update fixes known security vulnerabilities. Please see the details below and assess their impact carefully. We recommend to merge and deploy this as soon as possible!
Here is everything you need to know about this update. Please take a good look at what changed and the test results before merging this pull request.
Permissions-Policy is Only Served on HTML Content-Type
The application configurable Permissions-Policy is only served on responses
with an HTML related Content-Type.
This has been assigned the CVE identifier CVE-2024-28103.
Versions Affected: >= 6.1.0
Not affected: < 6.1.0
Fixed Versions: 6.1.7.8, 7.0.8.4, and 7.1.3.4
Impact
Responses with a non-HTML Content-Type are not serving the configured Permissions-Policy. There are certain non-HTML Content-Types that would benefit from having the Permissions-Policy enforced.
Releases
The fixed releases are available at the normal locations.
Workarounds
N/A
Patches
To aid users who aren't able to upgrade immediately we have provided patches for
the supported release series in accordance with our maintenance policy
regarding security issues. They are in git-am format and consist of a
single changeset.
6-1-include-permissions-policy-header-on-non-html.patch - Patch for 6.1 series
7-0-include-permissions-policy-header-on-non-html.patch - Patch for 7.0 series
7-1-include-permissions-policy-header-on-non-html.patch - Patch for 7.1 series
This release is essentially v1.3.0, but with a properly packaged gem. There was an issue publishing v1.3.0 and that gem needed to be yanked to avoid breaking downstream projects. The v1.3.0 changelog is reproduced below.
What's Changed
Add Concurrent.usable_processor_count that is cgroups aware by @casperisfine in #1038
Align Java Executor Service behavior for shuttingdown?, shutdown? by @bensheldon in #1042
* Define Erubi.h as a module function (jeremyevans)
* Add erubi/capture_block, supporting capturing block output via standard <%= and <%== tags (jeremyevans)
[CRuby] Vendored libxml2 is updated to v2.12.9, which the upstream release notes state is a security release to address CVE-2024-40896. Nokogiri's maintainers believe this vulnerability does not affect users of Nokogiri, but we advise upgrading at your earliest convenience anyway.
[CRuby] Vendored zlib in the precompiled native gems is updated to v1.3.1 from v1.3. Nokogiri is not affected by the minizip CVE patched in this version, but this update may satisfy some security scanners. Related, see this discussion about removing the compression libraries altogether in a future version of Nokogiri.
[CRuby] XML::Reader sets the @encoding instance variable during reading if it is not passed into the initializer. Previously, it would remain nil. The behavior of Reader#encoding has not changed. This works around changes to how libxml2 reports the encoding used in v2.12.6.
Fix log message when eager loading a directory ends.
2.6.16 (from changelog)
Logging prints a message when a directory that was not ignored is skipped
anyway because it contains no Ruby files.
Internal refactors.
2.6.15 (from changelog)
Internal improvements.
2.6.14 (from changelog)
Implements Zeitwerk::Loader#all_expected_cpaths, which returns a hash that
maps the absolute paths of the files and directories managed by the receiver
to their expected constant paths.
Please, check its documentation for further details.
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🚨 Your current dependencies have known security vulnerabilities 🚨
This dependency update fixes known security vulnerabilities. Please see the details below and assess their impact carefully. We recommend to merge and deploy this as soon as possible!
Here is everything you need to know about this update. Please take a good look at what changed and the test results before merging this pull request.
What changed?
✳️ rails (6.1.7.7 → 6.1.7.8) · Repo
Release Notes
6.1.7.8
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Commits
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✳️ minitest (5.22.3 → 5.24.1) · Repo · Changelog
Release Notes
5.24.1 (from changelog)
5.24.0 (from changelog)
5.23.1 (from changelog)
5.23.0 (from changelog)
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↗️ actioncable (indirect, 6.1.7.7 → 6.1.7.8) · Repo · Changelog
Release Notes
6.1.7.8 (from changelog)
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Commits
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↗️ actionmailbox (indirect, 6.1.7.7 → 6.1.7.8) · Repo · Changelog
↗️ actionmailer (indirect, 6.1.7.7 → 6.1.7.8) · Repo · Changelog
Release Notes
6.1.7.8 (from changelog)
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↗️ actionpack (indirect, 6.1.7.7 → 6.1.7.8) · Repo · Changelog
Security Advisories 🚨
🚨 Missing security headers in Action Pack on non-HTML responses
Release Notes
6.1.7.8 (from changelog)
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Commits
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↗️ actiontext (indirect, 6.1.7.7 → 6.1.7.8) · Repo · Changelog
Release Notes
6.1.7.8 (from changelog)
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↗️ actionview (indirect, 6.1.7.7 → 6.1.7.8) · Repo · Changelog
Release Notes
6.1.7.8 (from changelog)
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↗️ activejob (indirect, 6.1.7.7 → 6.1.7.8) · Repo · Changelog
Release Notes
6.1.7.8 (from changelog)
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↗️ activemodel (indirect, 6.1.7.7 → 6.1.7.8) · Repo · Changelog
Release Notes
6.1.7.8 (from changelog)
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↗️ activerecord (indirect, 6.1.7.7 → 6.1.7.8) · Repo · Changelog
Release Notes
6.1.7.8 (from changelog)
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↗️ activestorage (indirect, 6.1.7.7 → 6.1.7.8) · Repo · Changelog
Release Notes
6.1.7.8 (from changelog)
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↗️ activesupport (indirect, 6.1.7.7 → 6.1.7.8) · Repo · Changelog
Release Notes
6.1.7.8 (from changelog)
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↗️ builder (indirect, 3.2.4 → 3.3.0) · Repo · Changelog
Commits
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↗️ concurrent-ruby (indirect, 1.2.3 → 1.3.3) · Repo · Changelog
Release Notes
1.3.3
1.3.2
1.3.1
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Commits
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↗️ erubi (indirect, 1.12.0 → 1.13.0) · Repo · Changelog
Release Notes
1.13.0 (from changelog)
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↗️ i18n (indirect, 1.14.4 → 1.14.5) · Repo · Changelog
Release Notes
1.14.5
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↗️ method_source (indirect, 1.0.0 → 1.1.0) · Repo · Changelog
Commits
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↗️ net-imap (indirect, 0.4.10 → 0.4.14) · Repo
Release Notes
0.4.14
0.4.13
0.4.12
0.4.11
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↗️ net-smtp (indirect, 0.4.0.1 → 0.5.0) · Repo · Changelog
Release Notes
0.5.0
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Commits
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↗️ nio4r (indirect, 2.7.0 → 2.7.3) · Repo · Changelog
Release Notes
2.7.2 (from changelog)
2.7.1
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↗️ nokogiri (indirect, 1.16.2 → 1.16.7) · Repo · Changelog
Security Advisories 🚨
🚨 Nokogiri updates packaged libxml2 to v2.12.7 to resolve CVE-2024-34459
Release Notes
1.16.7
1.16.6
1.16.5
1.16.4
1.16.3
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↗️ railties (indirect, 6.1.7.7 → 6.1.7.8) · Repo · Changelog
Release Notes
6.1.7.8 (from changelog)
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↗️ rake (indirect, 13.1.0 → 13.2.1) · Repo · Changelog
Release Notes
13.2.1
13.2.0
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↗️ sprockets-rails (indirect, 3.4.2 → 3.5.2) · Repo · Changelog
Release Notes
3.5.1
3.5.0
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↗️ zeitwerk (indirect, 2.6.13 → 2.6.17) · Repo · Changelog
Release Notes
2.6.17 (from changelog)
2.6.16 (from changelog)
2.6.15 (from changelog)
2.6.14 (from changelog)
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