Y24-267 [Limber] LCM Triomics Pipeline WGS branch

[yoldas]

Closes #

Changes proposed in this pull request

• Pipeline and purpose config for WGS branch
• Filtering for Lib PCR tag plate creation from Adp Lig

Instructions for Reviewers

[All PRs] - Confirm PR template filled
[Feature Branches] - Review code
[Production Merges to main]
    - Check story numbers included
    - Check for debug code
    - Check version

[codecov[bot]]

Codecov Report

All modified and coverable lines are covered by tests :white_check_mark:

Project coverage is 78.26%. Comparing base (3ceac2f) to head (0d309d3). Report is 124 commits behind head on develop.

Additional details and impacted files

```diff @@ Coverage Diff @@ ## develop #1991 +/- ## =========================================== + Coverage 77.91% 78.26% +0.34% =========================================== Files 463 474 +11 Lines 17720 18268 +548 Branches 225 262 +37 =========================================== + Hits 13807 14297 +490 - Misses 3911 3969 +58 Partials 2 2 ``` | [Flag](https://app.codecov.io/gh/sanger/limber/pull/1991/flags?src=pr&el=flags&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=sanger) | Coverage Δ | | |---|---|---| | [javascript](https://app.codecov.io/gh/sanger/limber/pull/1991/flags?src=pr&el=flag&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=sanger) | `70.43% <ø> (+0.83%)` | :arrow_up: | | [pull_request](https://app.codecov.io/gh/sanger/limber/pull/1991/flags?src=pr&el=flag&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=sanger) | `78.02% <100.00%> (+0.10%)` | :arrow_up: | | [push](https://app.codecov.io/gh/sanger/limber/pull/1991/flags?src=pr&el=flag&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=sanger) | `77.95% <100.00%> (+0.04%)` | :arrow_up: | | [ruby](https://app.codecov.io/gh/sanger/limber/pull/1991/flags?src=pr&el=flag&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=sanger) | `91.21% <100.00%> (+0.05%)` | :arrow_up: | Flags with carried forward coverage won't be shown. [Click here](https://docs.codecov.io/docs/carryforward-flags?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=sanger#carryforward-flags-in-the-pull-request-comment) to find out more.

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[codeclimate[bot]]

Code Climate has analyzed commit 2ac87c0e and detected 0 issues on this pull request.

The test coverage on the diff in this pull request is 61.7% (50% is the threshold).

This pull request will bring the total coverage in the repository to 91.0% (0.0% change).

View more on Code Climate.